2. Evaluation

from pathlib import Path
import sys
import os
import pickle
import veloev as vev

with open("benchmark_info.pkl", "rb") as f:
    benchmark_info = pickle.load(f)

After post-processing, you can use the function below to evaluate the RNA velocity methods.

vev.evl.run_evaluation(benchmark_info, base_dir ='./demo')

🚀 Starting evaluation: 6 metric calculations across 3 datasets.

[17_pbmc68k] ees: 100%|██████████| 6/6 [00:12<00:00,  2.09s/metric]

✅ Evaluation completed.

In the last tutorial of this series, we will guide you through visualizing the evaluation results.